Visualizing results

This page has two uses, you can either visualize a local json output from the Bakta CLI, or you can reach these page by clicking on your Successful Bakta Web results.

Local results

results_upload

You can select a local json file here.

NOTE: This action does NOT upload any data, all visualizations are done in the browser on your local machine.

Results section

results_overview

When you correctly specified a result to visualize you will by directed to a page with your results. This page is structured into multiple tabs with useful visualizations and information.

  • Job statistics: Basic statistics of the job run (if available) and about your sequence, the number of annotated features etc.
  • Annotation table: A searchable table of all annotated features including cross-references to all available databases
  • Genomeviewer: An integrated IGV viewer to explore your annotated sequences.
  • Circular plot: An interactive circular plot of your annotated sequences.
  • Downloads: All Bakta output files as download for further processing.

Additionally this page contains a share button, with this you can share your annotation results to others.

NOTE: If you share the copied url you grant the recipient unrevokable access to this result.

Examples

Annotation table

annotation_table

Genomeviewer

genome_viewer

Circular plot

circular_plot

Downloads

downloads